Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC136621.1-201ENST00000624017 2304 ntBASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AC079776.1-201ENST00000401540 1152 ntBASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 DFFBP1-201ENST00000433250 979 ntBASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 SSR4P1-203ENST00000599569 2260 ntBASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 CLK3P2-201ENST00000427566 1453 ntBASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI2Q9Y5P3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC092658.1-201ENST00000505836 891 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC055876.2-201ENST00000531834 546 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC036164.1-201ENST00000570544 333 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC132938.2-201ENST00000579188 680 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 MIR6805-201ENST00000615055 62 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AL591163.1-201ENST00000641757 987 ntBASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAI2Q9Y5P3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAI2Q9Y5P3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms