Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 BX640514.1-201ENST00000583223 1918 ntBASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RCL1Q9Y2P8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.83□□□□□ -0.35
RCL1Q9Y2P8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 MRPL20P1-201ENST00000400819 433 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ATP5G2P1-201ENST00000433580 426 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 AC243562.2-201ENST00000561247 970 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 AL031432.2-201ENST00000566714 459 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 AL928711.1-201ENST00000570165 459 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 REXO1L1P-202ENST00000608646 1974 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 PMS2P7-201ENST00000506558 1336 ntBASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.83□□□□□ -0.36
RCL1Q9Y2P8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms