Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 SSR4P1-201ENST00000415143 412 ntBASIC6.15□□□□□ -1.43
MACF1Q9UPN3 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 HNRNPA1P36-201ENST00000521313 955 ntBASIC6.15□□□□□ -1.43
MACF1Q9UPN3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MACF1Q9UPN3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC006449.5-201ENST00000610658 2098 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 NRADDP-201ENST00000437305 691 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 RN7SL524P-201ENST00000581152 300 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC073869.4-201ENST00000620841 800 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 MIR1249-201ENST00000408671 66 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC132812.1-201ENST00000583145 892 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 IQCF4-203ENST00000428561 420 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC147876.1-201ENST00000504408 322 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 MIR4746-201ENST00000579802 71 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC016582.2-202ENST00000587765 1094 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC104117.4-201ENST00000521486 847 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC148476.1-201ENST00000622182 705 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 HNRNPA1P73-201ENST00000446472 928 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AL136298.3-201ENST00000556746 445 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms