Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC092910.1-201ENST00000482027 1129 ntBASIC14.32□□□□□ -0.12
CLN6Q9NWW5 UNC93B7-201ENST00000509439 705 ntBASIC14.32□□□□□ -0.12
CLN6Q9NWW5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 AC140479.7-201ENST00000636301 2332 ntBASIC14.32□□□□□ -0.12
CLN6Q9NWW5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 WASH3P-207ENST00000560956 1394 ntBASIC14.32□□□□□ -0.12
CLN6Q9NWW5 FO538757.1-201ENST00000623083 1397 ntBASIC14.32□□□□□ -0.12
CLN6Q9NWW5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLN6Q9NWW5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 AC104581.4-201ENST00000623126 3052 ntBASIC14.31□□□□□ -0.12
CLN6Q9NWW5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 IGLL3P-201ENST00000412472 434 ntBASIC14.31□□□□□ -0.12
CLN6Q9NWW5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 AC024267.1-201ENST00000582320 895 ntBASIC14.31□□□□□ -0.12
CLN6Q9NWW5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.31□□□□□ -0.12
CLN6Q9NWW5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CRYGEP-201ENST00000412192 528 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 EMBP1-201ENST00000458200 901 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 AL450472.2-201ENST00000603663 1156 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 AC148477.8-201ENST00000624298 468 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms