Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PC-204ENST00000524491 1714 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AL109659.2-201ENST00000606809 1674 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AL132642.2-201ENST00000623423 1998 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 KRT16P3-201ENST00000439127 1283 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 MIR3648-2-201ENST00000581792 180 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 MIR3648-1-201ENST00000615959 180 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 RBM17P2-201ENST00000616397 1405 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AC008620.2-201ENST00000510294 1569 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 FP325332.1-201ENST00000624818 2045 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 AL109976.1-201ENST00000621919 5678 ntBASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CDC42SE1Q9NRR8 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AC034236.2-201ENST00000606662 1610 ntBASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms