Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AL591424.1-201ENST00000442569 1213 ntBASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 IGHV3-62-201ENST00000520057 340 ntBASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 KRT8P23-201ENST00000560090 1207 ntBASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AC243562.1-201ENST00000560672 389 ntBASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AC091812.2-201ENST00000619081 385 ntBASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF259P1-201ENST00000407656 1365 ntBASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SPDYE11-202ENST00000450699 704 ntBASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AC009078.2-202ENST00000463353 338 ntBASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SPDYE9P-201ENST00000570642 692 ntBASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SPDYE10P-202ENST00000612005 668 ntBASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SPDYE8P-202ENST00000612377 668 ntBASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE2Q9NRR3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 AC084364.1-201ENST00000551967 1556 ntBASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 AP3S2-216ENST00000617003 1561 ntBASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms