Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 FAM86GP-201ENST00000448322 971 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 LINC01115-203ENST00000606068 577 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AF228730.6-201ENST00000641497 218 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC084121.3-201ENST00000641716 218 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC138969.3-201ENST00000546612 1459 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC138932.2-201ENST00000548268 1459 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AC126755.4-201ENST00000549796 1459 ntBASIC14.93□□□□□ -0.02
BRF2Q9HAW0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.92□□□□□ -0.02
BRF2Q9HAW0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 AC092580.3-201ENST00000430932 139 ntBASIC14.92□□□□□ -0.02
BRF2Q9HAW0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 AL109936.8-201ENST00000641772 604 ntBASIC14.92□□□□□ -0.02
BRF2Q9HAW0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 LINC01101-201ENST00000622953 1884 ntBASIC14.92□□□□□ -0.02
BRF2Q9HAW0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRF2Q9HAW0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 AC067930.6-201ENST00000623257 4947 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 MST1L-201ENST00000442552 2185 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms