Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 TOMM22P5-201ENST00000416399 439 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC253536.4-201ENST00000440539 267 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC004898.1-201ENST00000451057 766 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC245100.5-201ENST00000452108 331 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 LDHBP1-201ENST00000455730 1119 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 VDAC1P7-201ENST00000462417 847 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC091804.1-201ENST00000486888 567 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC020914.3-201ENST00000594712 304 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 AC005252.2-201ENST00000624630 1141 ntBASIC18.18■□□□□ 0.5
EFCC1Q9HA90 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFCC1Q9HA90 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 BX284668.4-201ENST00000453917 508 ntBASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 GNRHR2-203ENST00000581100 1187 ntBASIC18.17■□□□□ 0.5
EFCC1Q9HA90 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.17■□□□□ 0.5
EFCC1Q9HA90 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFCC1Q9HA90 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.16■□□□□ 0.5
EFCC1Q9HA90 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms