Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 DUX4L45-201ENST00000566406 1057 ntBASIC16.21■□□□□ 0.19
LRRC3Q9BY71 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3Q9BY71 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3Q9BY71 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 AC025181.2-201ENST00000606994 802 ntBASIC16.2■□□□□ 0.18
LRRC3Q9BY71 AC145423.3-201ENST00000615987 467 ntBASIC16.2■□□□□ 0.18
LRRC3Q9BY71 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3Q9BY71 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 C2orf27AP3-201ENST00000434123 579 ntBASIC16.19■□□□□ 0.18
LRRC3Q9BY71 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AC108725.1-201ENST00000495472 409 ntBASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AL354718.3-201ENST00000616414 581 ntBASIC16.19■□□□□ 0.18
LRRC3Q9BY71 CR382287.1-201ENST00000623954 586 ntBASIC16.19■□□□□ 0.18
LRRC3Q9BY71 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms