Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CU639417.3-201ENST00000624240 1404 ntBASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 GAPDHP21-201ENST00000450301 1010 ntBASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 AC011495.1-201ENST00000498085 584 ntBASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 LINC02447-202ENST00000501888 2146 ntBASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 AL158212.4-201ENST00000624062 1286 ntBASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 CDC14C-201ENST00000428251 1719 ntBASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 DGCR5-201ENST00000399539 862 ntBASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 CR383656.12-201ENST00000549567 513 ntBASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AC097359.3-201ENST00000603982 1210 ntBASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 CLK3P2-201ENST00000427566 1453 ntBASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP3Q9BWW4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSBP3Q9BWW4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms