Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CGREF1Q99674 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.89□□□□□ -0.03
CGREF1Q99674 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
CGREF1Q99674 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
CGREF1Q99674 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
CGREF1Q99674 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 WASH3P-207ENST00000560956 1394 ntBASIC14.89□□□□□ -0.03
CGREF1Q99674 FO538757.1-201ENST00000623083 1397 ntBASIC14.89□□□□□ -0.03
CGREF1Q99674 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.89□□□□□ -0.03
CGREF1Q99674 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 HLA-H-201ENST00000383620 1096 ntBASIC14.89□□□□□ -0.03
CGREF1Q99674 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 AL355306.1-201ENST00000415580 579 ntBASIC14.89□□□□□ -0.03
CGREF1Q99674 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.89□□□□□ -0.03
CGREF1Q99674 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 AL671277.1-201ENST00000429656 993 ntBASIC14.89□□□□□ -0.03
CGREF1Q99674 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.89□□□□□ -0.03
CGREF1Q99674 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.89□□□□□ -0.03
CGREF1Q99674 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 AC026979.3-201ENST00000607315 403 ntBASIC14.89□□□□□ -0.03
CGREF1Q99674 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.89□□□□□ -0.03
CGREF1Q99674 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.89□□□□□ -0.03
CGREF1Q99674 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.89□□□□□ -0.03
CGREF1Q99674 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CGREF1Q99674 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CGREF1Q99674 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.88□□□□□ -0.03
CGREF1Q99674 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.88□□□□□ -0.03
CGREF1Q99674 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.88□□□□□ -0.03
CGREF1Q99674 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.88□□□□□ -0.03
CGREF1Q99674 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.88□□□□□ -0.03
CGREF1Q99674 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 RPL5P21-201ENST00000404620 815 ntBASIC14.88□□□□□ -0.03
CGREF1Q99674 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.88□□□□□ -0.03
CGREF1Q99674 AC136604.1-201ENST00000418535 575 ntBASIC14.88□□□□□ -0.03
CGREF1Q99674 AL450487.1-201ENST00000426799 995 ntBASIC14.88□□□□□ -0.03
CGREF1Q99674 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.88□□□□□ -0.03
CGREF1Q99674 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.88□□□□□ -0.03
CGREF1Q99674 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.88□□□□□ -0.03
CGREF1Q99674 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.88□□□□□ -0.03
CGREF1Q99674 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CGREF1Q99674 AC092865.6-201ENST00000642101 219 ntBASIC14.88□□□□□ -0.03
CGREF1Q99674 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.88□□□□□ -0.03
CGREF1Q99674 AL607033.1-201ENST00000623900 1599 ntBASIC14.88□□□□□ -0.03
CGREF1Q99674 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CGREF1Q99674 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.88□□□□□ -0.03
CGREF1Q99674 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.88□□□□□ -0.03
CGREF1Q99674 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CGREF1Q99674 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms