Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 FO681548.1-201ENST00000455617 1132 ntBASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 MIR4525-201ENST00000580000 75 ntBASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 AC145423.3-201ENST00000615987 467 ntBASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 PCDHA1-201ENST00000378133 2726 ntBASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 BRWD1P1-201ENST00000401091 371 ntBASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 FAM197Y7-201ENST00000432892 766 ntBASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AL590640.2-201ENST00000457038 527 ntBASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 AC008741.2-201ENST00000612792 3115 ntBASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC85AQ96PX6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 ACKR1-201ENST00000368121 1240 ntBASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 FAM21FP-201ENST00000426241 1131 ntBASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 C2orf27AP3-201ENST00000434123 579 ntBASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 AL354718.3-201ENST00000616414 581 ntBASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 CR382287.1-201ENST00000623954 586 ntBASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC85AQ96PX6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CCDC85AQ96PX6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms