Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECAB3Q96P71 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 AC006158.1-201ENST00000610661 249 ntBASIC15.84■□□□□ 0.13
NECAB3Q96P71 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 AC233280.19-201ENST00000633223 136 ntBASIC15.84■□□□□ 0.13
NECAB3Q96P71 NAP1L6-202ENST00000641404 1222 ntBASIC15.84■□□□□ 0.13
NECAB3Q96P71 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECAB3Q96P71 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECAB3Q96P71 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECAB3Q96P71 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECAB3Q96P71 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.84■□□□□ 0.13
NECAB3Q96P71 FER1L4-210ENST00000615531 5998 ntBASIC15.84■□□□□ 0.13
NECAB3Q96P71 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECAB3Q96P71 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NECAB3Q96P71 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.83■□□□□ 0.13
NECAB3Q96P71 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
NECAB3Q96P71 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 TUBB8P8-201ENST00000458717 1058 ntBASIC15.83■□□□□ 0.12
NECAB3Q96P71 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 ALG1L6P-201ENST00000515248 758 ntBASIC15.83■□□□□ 0.12
NECAB3Q96P71 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 AC027139.1-201ENST00000565286 951 ntBASIC15.83■□□□□ 0.12
NECAB3Q96P71 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 MIR5196-201ENST00000578146 115 ntBASIC15.83■□□□□ 0.12
NECAB3Q96P71 MME-218ENST00000625667 363 ntTSL 5 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 LINC00431-202ENST00000636375 159 ntBASIC15.83■□□□□ 0.12
NECAB3Q96P71 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 AC067852.2-201ENST00000590513 2313 ntBASIC15.83■□□□□ 0.12
NECAB3Q96P71 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NECAB3Q96P71 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.83■□□□□ 0.12
NECAB3Q96P71 CROCCP2-202ENST00000412962 2773 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 AC099398.1-201ENST00000567919 2776 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 AC134407.2-201ENST00000625089 1978 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 AC008764.6-201ENST00000595909 2069 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 AL603756.1-201ENST00000606511 2163 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 OR6D1P-203ENST00000641209 4860 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 RCC2P8-201ENST00000502779 1035 ntBASIC15.82■□□□□ 0.12
NECAB3Q96P71 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.82■□□□□ 0.12
NECAB3Q96P71 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECAB3Q96P71 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NECAB3Q96P71 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECAB3Q96P71 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NECAB3Q96P71 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NECAB3Q96P71 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms