Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPRD1AQ96P16 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AC098614.1-201ENST00000368528 745 ntBASIC16.06■□□□□ 0.16
RPRD1AQ96P16 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AC005225.4-201ENST00000557330 545 ntBASIC16.06■□□□□ 0.16
RPRD1AQ96P16 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 BRI3BPP1-201ENST00000594224 787 ntBASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 AC063926.3-201ENST00000624734 5658 ntBASIC16.06■□□□□ 0.16
RPRD1AQ96P16 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPRD1AQ96P16 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 AL442647.2-201ENST00000429864 857 ntBASIC16.05■□□□□ 0.16
RPRD1AQ96P16 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 VDAC1P7-201ENST00000462417 847 ntBASIC16.05■□□□□ 0.16
RPRD1AQ96P16 RN7SL752P-201ENST00000463779 287 ntBASIC16.05■□□□□ 0.16
RPRD1AQ96P16 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 WFDC1-204ENST00000613603 549 ntBASIC16.05■□□□□ 0.16
RPRD1AQ96P16 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 AC090616.6-203ENST00000579186 1945 ntBASIC16.05■□□□□ 0.16
RPRD1AQ96P16 AC046158.3-201ENST00000624947 2558 ntBASIC16.05■□□□□ 0.16
RPRD1AQ96P16 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPRD1AQ96P16 AC084364.1-201ENST00000551967 1556 ntBASIC16.04■□□□□ 0.16
RPRD1AQ96P16 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.04■□□□□ 0.16
RPRD1AQ96P16 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.04■□□□□ 0.16
RPRD1AQ96P16 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPRD1AQ96P16 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPRD1AQ96P16 INTS4P2-202ENST00000614726 2019 ntBASIC16.04■□□□□ 0.16
RPRD1AQ96P16 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPRD1AQ96P16 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPRD1AQ96P16 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms