Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 AC069335.1-201ENST00000489972 472 ntBASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 MED15P5-201ENST00000423150 992 ntBASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 AL645939.2-201ENST00000427340 991 ntBASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 AC010327.4-202ENST00000591484 748 ntBASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHAMP1Q96JM3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 HIST3H2BA-201ENST00000436555 524 ntBASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 AL139010.1-201ENST00000454878 894 ntBASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHAMP1Q96JM3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms