Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC138969.2-201ENST00000532739 9932 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AL359258.3-201ENST00000622910 2331 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 RPL5P21-201ENST00000404620 815 ntBASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 RPS8P6-201ENST00000426177 609 ntBASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 PHKG1P2-201ENST00000457537 863 ntBASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 AC092865.5-201ENST00000545435 363 ntBASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 AC068137.2-201ENST00000605408 478 ntBASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXRED1Q96CU9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 AC232323.1-201ENST00000540724 2099 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 REXO1L5P-201ENST00000622260 2098 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 GRK6P1-201ENST00000400595 1711 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 AC023274.1-201ENST00000418278 595 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 MCCD1P2-201ENST00000423228 335 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 AC074386.1-202ENST00000463561 864 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 CICP4-201ENST00000447359 2812 ntBASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXRED1Q96CU9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms