Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 AL109936.8-201ENST00000641772 604 ntBASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 AC100757.3-201ENST00000622361 1406 ntBASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RHBDF1Q96CC6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 FAM45BP-202ENST00000592932 1624 ntBASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AL133267.1-201ENST00000398220 340 ntBASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 ZNF890P-202ENST00000530367 1156 ntBASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AL590560.3-201ENST00000623350 461 ntBASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 AP002414.2-201ENST00000591780 3365 ntBASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHBDF1Q96CC6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.21■□□□□ 0.02
RHBDF1Q96CC6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RHBDF1Q96CC6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 MIR943-201ENST00000401286 94 ntBASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 TOMM22P5-201ENST00000416399 439 ntBASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AC044860.1-202ENST00000559481 777 ntBASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RHBDF1Q96CC6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms