Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CASKIN1Q8WXD9 MIR3619-201ENST00000579667 83 ntBASIC23.73■■□□□ 1.39
CASKIN1Q8WXD9 AL645939.5-201ENST00000606834 243 ntBASIC23.73■■□□□ 1.39
CASKIN1Q8WXD9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 LINC02199-201ENST00000506655 2702 ntBASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AL139384.1-201ENST00000612143 3047 ntBASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AC012508.2-201ENST00000567613 1472 ntBASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AL137783.1-201ENST00000623494 1896 ntBASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 AC092850.2-201ENST00000623821 2697 ntBASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC23.72■■□□□ 1.39
CASKIN1Q8WXD9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 SLC25A24P2-201ENST00000415059 510 ntBASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 AC005077.2-201ENST00000449786 690 ntBASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 NDUFV2P1-201ENST00000596415 907 ntBASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CASKIN1Q8WXD9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CASKIN1Q8WXD9 AC020658.6-201ENST00000623564 1870 ntBASIC23.7■■□□□ 1.39
CASKIN1Q8WXD9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 AL138725.1-201ENST00000407347 1314 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 FKBP4P6-201ENST00000457486 1332 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 FNTAP2-201ENST00000430308 634 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 AC106872.11-201ENST00000605838 421 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 AL162426.1-201ENST00000624141 743 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 AC138627.1-207ENST00000641560 1006 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 INE2-201ENST00000630399 1874 ntBASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASKIN1Q8WXD9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 AC013355.1-201ENST00000562625 723 ntBASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms