Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 AC234782.1-201ENST00000451950 919 ntBASIC18.65■□□□□ 0.58
SNED1Q8TER0 RNMTL1P1-201ENST00000454103 560 ntBASIC18.65■□□□□ 0.58
SNED1Q8TER0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SNED1Q8TER0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.64■□□□□ 0.58
SNED1Q8TER0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SNED1Q8TER0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SNED1Q8TER0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
SNED1Q8TER0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNED1Q8TER0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNED1Q8TER0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AL160314.3-201ENST00000556041 767 ntBASIC18.64■□□□□ 0.57
SNED1Q8TER0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AL358472.3-201ENST00000608147 415 ntBASIC18.64■□□□□ 0.57
SNED1Q8TER0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 AP000593.2-201ENST00000542775 1433 ntBASIC18.64■□□□□ 0.57
SNED1Q8TER0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNED1Q8TER0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNED1Q8TER0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 AC024909.3-201ENST00000611513 2257 ntBASIC18.63■□□□□ 0.57
SNED1Q8TER0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 AC011742.3-201ENST00000439053 820 ntBASIC18.63■□□□□ 0.57
SNED1Q8TER0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 AC022616.1-201ENST00000518688 554 ntBASIC18.63■□□□□ 0.57
SNED1Q8TER0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 IQSEC3P1-201ENST00000538799 536 ntBASIC18.63■□□□□ 0.57
SNED1Q8TER0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 AL353770.1-201ENST00000614915 403 ntBASIC18.63■□□□□ 0.57
SNED1Q8TER0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 AC099398.1-201ENST00000567919 2776 ntBASIC18.63■□□□□ 0.57
SNED1Q8TER0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNED1Q8TER0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.63■□□□□ 0.57
SNED1Q8TER0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms