Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 TERF1P3-201ENST00000505638 1227 ntBASIC16.52■□□□□ 0.24
UBA3Q8TBC4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 AC138761.1-201ENST00000584393 385 ntBASIC16.52■□□□□ 0.24
UBA3Q8TBC4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
UBA3Q8TBC4 TMBIM7P-203ENST00000641617 1718 ntBASIC16.52■□□□□ 0.24
UBA3Q8TBC4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
UBA3Q8TBC4 AC092384.3-202ENST00000564646 2873 ntBASIC16.52■□□□□ 0.23
UBA3Q8TBC4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 AC112693.3-201ENST00000624819 1983 ntBASIC16.51■□□□□ 0.23
UBA3Q8TBC4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 RN7SL399P-201ENST00000471648 279 ntBASIC16.51■□□□□ 0.23
UBA3Q8TBC4 AC093004.1-201ENST00000508850 424 ntBASIC16.51■□□□□ 0.23
UBA3Q8TBC4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 C18orf15-201ENST00000623680 2534 ntBASIC16.51■□□□□ 0.23
UBA3Q8TBC4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBA3Q8TBC4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 API5-211ENST00000534695 560 ntTSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 NORAD-201ENST00000565493 5339 ntBASIC16.5■□□□□ 0.23
UBA3Q8TBC4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBA3Q8TBC4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBA3Q8TBC4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms