Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC004461.2-201ENST00000629517 803 ntBASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCC2Q8TAQ2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 AGAP7P-201ENST00000582299 2062 ntBASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 AGAP14-201ENST00000624701 2060 ntBASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 KRT18P64-201ENST00000434946 1219 ntBASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCC2Q8TAQ2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 NFIC-211ENST00000641145 8399 ntBASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 COX20P2-201ENST00000452636 358 ntBASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 SPDYE18-201ENST00000510091 1050 ntBASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 AC074044.1-201ENST00000609673 707 ntBASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCC2Q8TAQ2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms