Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AC104306.2-201ENST00000451877 341 ntBASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 RNA5SP486-201ENST00000515961 83 ntBASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AC008894.3-201ENST00000624324 3103 ntBASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AC005052.1-201ENST00000625181 2492 ntBASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPOQ8N3V7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 FAM197Y7-201ENST00000432892 766 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC004898.1-201ENST00000451057 766 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AL591846.1-201ENST00000451736 433 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC078819.1-201ENST00000547454 765 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC012085.1-201ENST00000548270 765 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AC145423.3-201ENST00000615987 467 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 AL008638.5-201ENST00000623814 1298 ntBASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPOQ8N3V7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPOQ8N3V7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms