Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC21.07■□□□□ 0.96
XRN1Q8IZH2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AC112504.1-201ENST00000623415 1841 ntBASIC21.06■□□□□ 0.96
XRN1Q8IZH2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AC074138.1-201ENST00000611182 1303 ntBASIC21.06■□□□□ 0.96
XRN1Q8IZH2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AC006058.4-201ENST00000624016 1670 ntBASIC21.06■□□□□ 0.96
XRN1Q8IZH2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRN1Q8IZH2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 MIR6842-201ENST00000612539 65 ntBASIC21.05■□□□□ 0.96
XRN1Q8IZH2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
XRN1Q8IZH2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 AL645933.1-201ENST00000440087 609 ntBASIC21.04■□□□□ 0.96
XRN1Q8IZH2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 RPL18AP3-201ENST00000462885 528 ntBASIC21.04■□□□□ 0.96
XRN1Q8IZH2 RN7SL258P-201ENST00000478664 300 ntBASIC21.04■□□□□ 0.96
XRN1Q8IZH2 AC006122.1-201ENST00000493323 440 ntBASIC21.04■□□□□ 0.96
XRN1Q8IZH2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 ALG3P1-201ENST00000508806 1114 ntBASIC21.04■□□□□ 0.96
XRN1Q8IZH2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 DNM1P30-201ENST00000563586 452 ntBASIC21.04■□□□□ 0.96
XRN1Q8IZH2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRN1Q8IZH2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 TNRC18P3-201ENST00000441896 2691 ntBASIC21.03■□□□□ 0.96
XRN1Q8IZH2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms