Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 FNTAP2-201ENST00000430308 634 ntBASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 RPSAP36-202ENST00000494591 1261 ntBASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 GAPDHP40-201ENST00000505218 1006 ntBASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AP006547.1-201ENST00000563435 692 ntBASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 AC006449.6-201ENST00000612330 2296 ntBASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEFF1Q8IYR6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms