Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 AC079325.1-201ENST00000430386 857 ntBASIC15.3■□□□□ 0.04
CUL9Q8IWT3 B9D1-206ENST00000461069 923 ntTSL 2 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 AC008026.2-201ENST00000495438 348 ntBASIC15.3■□□□□ 0.04
CUL9Q8IWT3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.3■□□□□ 0.04
CUL9Q8IWT3 ACTBP9-201ENST00000587663 1099 ntBASIC15.3■□□□□ 0.04
CUL9Q8IWT3 SHC1P1-201ENST00000425230 1745 ntBASIC15.29■□□□□ 0.04
CUL9Q8IWT3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 AC104961.1-201ENST00000427605 771 ntBASIC15.29■□□□□ 0.04
CUL9Q8IWT3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.29■□□□□ 0.04
CUL9Q8IWT3 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 KRT8P14-201ENST00000414254 1442 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 AC244394.1-201ENST00000435000 1665 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 RN7SKP175-201ENST00000408472 289 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 CDCA4P4-201ENST00000435216 680 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 KRT18P46-201ENST00000435568 1279 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 POLR2LP1-206ENST00000444785 187 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 ALG1L3P-201ENST00000503331 765 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.28■□□□□ 0.04
CUL9Q8IWT3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CUL9Q8IWT3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUL9Q8IWT3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms