Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 GHSR-202ENST00000427970 912 ntBASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 AC027369.6-201ENST00000525520 931 ntBASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD1LQ86WJ1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.27■□□□□ 0.67
CHD1LQ86WJ1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD1LQ86WJ1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.27■□□□□ 0.67
CHD1LQ86WJ1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD1LQ86WJ1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.27■□□□□ 0.67
CHD1LQ86WJ1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 AC107890.1-201ENST00000422478 521 ntBASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 AL844908.2-201ENST00000609461 460 ntBASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 AC093028.1-201ENST00000622998 982 ntBASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 WASH3P-207ENST00000560956 1394 ntBASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD1LQ86WJ1 AC087499.5-201ENST00000452760 1342 ntBASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 AC097493.3-201ENST00000509725 367 ntBASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 SDHAP3-202ENST00000515467 728 ntBASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 AL121723.1-201ENST00000445194 1519 ntBASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD1LQ86WJ1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AC068418.2-201ENST00000577309 3703 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms