Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP50Q70EL3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.05■□□□□ 0.48
USP50Q70EL3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
USP50Q70EL3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.05■□□□□ 0.48
USP50Q70EL3 AC079112.1-201ENST00000454972 939 ntBASIC18.05■□□□□ 0.48
USP50Q70EL3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.05■□□□□ 0.48
USP50Q70EL3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.05■□□□□ 0.48
USP50Q70EL3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.05■□□□□ 0.48
USP50Q70EL3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.05■□□□□ 0.48
USP50Q70EL3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.05■□□□□ 0.48
USP50Q70EL3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP50Q70EL3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.05■□□□□ 0.48
USP50Q70EL3 E2F3P2-201ENST00000447755 1422 ntBASIC18.05■□□□□ 0.48
USP50Q70EL3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 AL133373.2-201ENST00000623187 2828 ntBASIC18.04■□□□□ 0.48
USP50Q70EL3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.04■□□□□ 0.48
USP50Q70EL3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.04■□□□□ 0.48
USP50Q70EL3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.04■□□□□ 0.48
USP50Q70EL3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 AC130709.1-201ENST00000484779 1212 ntBASIC18.04■□□□□ 0.48
USP50Q70EL3 RN7SL67P-201ENST00000492147 296 ntBASIC18.04■□□□□ 0.48
USP50Q70EL3 IGHV3-37-201ENST00000518544 340 ntBASIC18.04■□□□□ 0.48
USP50Q70EL3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.04■□□□□ 0.48
USP50Q70EL3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.04■□□□□ 0.48
USP50Q70EL3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.04■□□□□ 0.48
USP50Q70EL3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP50Q70EL3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 FAM90A2P-201ENST00000511144 1395 ntBASIC18.04■□□□□ 0.48
USP50Q70EL3 FAM90A25P-201ENST00000528404 1395 ntBASIC18.04■□□□□ 0.48
USP50Q70EL3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP50Q70EL3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP50Q70EL3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.03■□□□□ 0.48
USP50Q70EL3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 AP000356.3-201ENST00000382243 753 ntBASIC18.03■□□□□ 0.48
USP50Q70EL3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
USP50Q70EL3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.03■□□□□ 0.48
USP50Q70EL3 AC012441.2-201ENST00000444843 739 ntBASIC18.03■□□□□ 0.48
USP50Q70EL3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.03■□□□□ 0.48
USP50Q70EL3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.03■□□□□ 0.48
USP50Q70EL3 AL157792.1-201ENST00000488281 530 ntBASIC18.03■□□□□ 0.48
USP50Q70EL3 AC141586.1-203ENST00000567242 366 ntBASIC18.03■□□□□ 0.48
USP50Q70EL3 AC026803.1-201ENST00000569130 274 ntBASIC18.03■□□□□ 0.48
USP50Q70EL3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.03■□□□□ 0.48
USP50Q70EL3 AC008805.1-201ENST00000590892 364 ntBASIC18.03■□□□□ 0.48
USP50Q70EL3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
USP50Q70EL3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP50Q70EL3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP50Q70EL3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.03■□□□□ 0.48
USP50Q70EL3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP50Q70EL3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.03■□□□□ 0.48
USP50Q70EL3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP50Q70EL3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP50Q70EL3 AC007613.1-201ENST00000572811 2597 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms