Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 FP325330.2-201ENST00000624219 5630 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 AL512652.2-201ENST00000625156 1716 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 CRYGEP-201ENST00000412192 528 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 GPX1P2-201ENST00000429271 606 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 AL353135.1-201ENST00000606729 504 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 GGTLC5P-201ENST00000617623 998 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 STRCP1-201ENST00000509801 5328 ntBASIC13.74□□□□□ -0.21
C11orf88Q6PI97 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 GPAA1P2-202ENST00000606848 1787 ntBASIC13.73□□□□□ -0.21
C11orf88Q6PI97 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AC117489.1-201ENST00000625169 3217 ntBASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 YBX2P1-201ENST00000394192 760 ntBASIC13.73□□□□□ -0.21
C11orf88Q6PI97 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AC008667.4-201ENST00000607370 168 ntBASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AL691403.2-201ENST00000618460 490 ntBASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AP001350.2-201ENST00000625104 1094 ntBASIC13.73□□□□□ -0.21
C11orf88Q6PI97 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms