Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 RN7SL828P-201ENST00000607615 303 ntBASIC14.27□□□□□ -0.13
NIPAL3Q6P499 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 AC007292.2-201ENST00000593524 1812 ntBASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 TUBB3P1-201ENST00000405796 1332 ntBASIC14.26□□□□□ -0.13
NIPAL3Q6P499 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 AC004987.2-201ENST00000395959 1148 ntBASIC14.26□□□□□ -0.13
NIPAL3Q6P499 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 FAM86GP-201ENST00000448322 971 ntBASIC14.26□□□□□ -0.13
NIPAL3Q6P499 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.26□□□□□ -0.13
NIPAL3Q6P499 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 AC125807.1-201ENST00000483097 614 ntBASIC14.26□□□□□ -0.13
NIPAL3Q6P499 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 BANF1P1-201ENST00000553684 263 ntBASIC14.26□□□□□ -0.13
NIPAL3Q6P499 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NIPAL3Q6P499 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms