Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SOCS2P1-201ENST00000417727 557 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 USP32P1-208ENST00000506594 1164 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AC026410.3-201ENST00000514280 936 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 RAB43P1-201ENST00000561790 589 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AC015910.1-201ENST00000579400 975 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 MIR6752-201ENST00000618442 71 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 LINC02447-202ENST00000501888 2146 ntBASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.45□□□□□ -0.1
H3F3CQ6NXT2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 AC112504.1-201ENST00000623415 1841 ntBASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3CQ6NXT2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms