Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 REXO1L1P-202ENST00000608646 1974 ntBASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AL603832.2-201ENST00000566195 2125 ntBASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AC093214.1-201ENST00000511688 1107 ntBASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 SDHAP3-202ENST00000515467 728 ntBASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AL390754.1-201ENST00000619088 582 ntBASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 AC134407.2-201ENST00000625089 1978 ntBASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 CDC14C-201ENST00000428251 1719 ntBASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 LINC02447-202ENST00000501888 2146 ntBASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NIPAL1Q6NVV3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 AL122018.1-201ENST00000446607 2310 ntBASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NIPAL1Q6NVV3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms