Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AC010319.3-201ENST00000597028 470 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 MIR6805-201ENST00000615055 62 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 LINC00554-201ENST00000564841 3011 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 REXO1L1P-202ENST00000608646 1974 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 HLA-V-201ENST00000429037 534 ntBASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AC103702.1-201ENST00000548801 2630 ntBASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 MIR4259-201ENST00000584466 101 ntBASIC14.11□□□□□ -0.15
RTL6Q6ICC9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RTL6Q6ICC9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 HYMAI-201ENST00000635591 3347 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms