Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 AL009183.1-201ENST00000603760 355 ntBASIC15.14■□□□□ 0.01
RNF220Q5VTB9 AC023141.13-201ENST00000604991 943 ntBASIC15.14■□□□□ 0.01
RNF220Q5VTB9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 AC089987.1-201ENST00000551654 2209 ntBASIC15.14■□□□□ 0.01
RNF220Q5VTB9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 AC090616.6-203ENST00000579186 1945 ntBASIC15.13■□□□□ 0.01
RNF220Q5VTB9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 MIR648-201ENST00000385046 94 ntBASIC15.13■□□□□ 0.01
RNF220Q5VTB9 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 AC092127.1-201ENST00000567093 3455 ntBASIC15.13■□□□□ 0.01
RNF220Q5VTB9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF220Q5VTB9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms