Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC092933.1-201ENST00000393644 945 ntBASIC18.7■□□□□ 0.58
RFX7Q2KHR2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC012441.1-201ENST00000446669 685 ntBASIC18.7■□□□□ 0.58
RFX7Q2KHR2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 CTBP2P5-201ENST00000454986 1264 ntBASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC022494.1-201ENST00000466044 728 ntBASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC107373.2-201ENST00000607735 490 ntBASIC18.7■□□□□ 0.58
RFX7Q2KHR2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RFX7Q2KHR2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 AC092658.1-201ENST00000505836 891 ntBASIC18.69■□□□□ 0.58
RFX7Q2KHR2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 AL022328.1-201ENST00000610050 478 ntBASIC18.69■□□□□ 0.58
RFX7Q2KHR2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 DRD5P1-201ENST00000456605 1438 ntBASIC18.69■□□□□ 0.58
RFX7Q2KHR2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX7Q2KHR2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 AP000812.2-201ENST00000538934 718 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms