Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 AC012441.2-201ENST00000444843 739 ntBASIC19.2■□□□□ 0.66
R3HDM1Q15032 RN7SL81P-201ENST00000493781 261 ntBASIC19.2■□□□□ 0.66
R3HDM1Q15032 AC004066.1-201ENST00000502488 802 ntBASIC19.2■□□□□ 0.66
R3HDM1Q15032 AP000911.2-201ENST00000534330 502 ntBASIC19.2■□□□□ 0.66
R3HDM1Q15032 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 AC055811.4-201ENST00000624039 1754 ntBASIC19.19■□□□□ 0.66
R3HDM1Q15032 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 ABHD17AP9-201ENST00000561925 548 ntBASIC19.19■□□□□ 0.66
R3HDM1Q15032 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 AC244394.1-201ENST00000435000 1665 ntBASIC19.19■□□□□ 0.66
R3HDM1Q15032 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.19■□□□□ 0.66
R3HDM1Q15032 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM1Q15032 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HDM1Q15032 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 AC005962.1-201ENST00000584100 773 ntBASIC19.18■□□□□ 0.66
R3HDM1Q15032 AC007326.1-201ENST00000604539 458 ntBASIC19.18■□□□□ 0.66
R3HDM1Q15032 AL353622.2-201ENST00000605846 425 ntBASIC19.18■□□□□ 0.66
R3HDM1Q15032 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HDM1Q15032 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM1Q15032 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 AC010141.1-201ENST00000411585 623 ntBASIC19.17■□□□□ 0.66
R3HDM1Q15032 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.17■□□□□ 0.66
R3HDM1Q15032 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 ORAOV1P1-201ENST00000503108 395 ntBASIC19.17■□□□□ 0.66
R3HDM1Q15032 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM1Q15032 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms