Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 AC104457.1-201ENST00000401024 814 ntBASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 BNIP3P42-201ENST00000454982 569 ntBASIC16.9■□□□□ 0.3
CDC42EP1Q00587 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 BNIP3P29-201ENST00000598302 571 ntBASIC16.9■□□□□ 0.3
CDC42EP1Q00587 AC011447.5-201ENST00000616168 564 ntBASIC16.9■□□□□ 0.3
CDC42EP1Q00587 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 AC026691.1-201ENST00000602502 2017 ntBASIC16.9■□□□□ 0.3
CDC42EP1Q00587 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDC42EP1Q00587 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.89■□□□□ 0.3
CDC42EP1Q00587 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDC42EP1Q00587 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 KRT8P14-201ENST00000414254 1442 ntBASIC16.89■□□□□ 0.29
CDC42EP1Q00587 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 AC244669.2-201ENST00000612320 853 ntBASIC16.89■□□□□ 0.29
CDC42EP1Q00587 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CDC42EP1Q00587 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42EP1Q00587 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDC42EP1Q00587 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42EP1Q00587 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDC42EP1Q00587 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms