Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.26□□□□□ -0.61
LINC00315P59091 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 AL139400.1-201ENST00000366220 510 ntBASIC11.26□□□□□ -0.61
LINC00315P59091 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00315P59091 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 KRT18P32-201ENST00000424695 1287 ntBASIC11.26□□□□□ -0.61
LINC00315P59091 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00315P59091 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC00315P59091 IGHV3-62-201ENST00000520057 340 ntBASIC11.26□□□□□ -0.61
LINC00315P59091 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC00315P59091 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00315P59091 AC025678.2-201ENST00000562061 970 ntBASIC11.26□□□□□ -0.61
LINC00315P59091 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00315P59091 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC00315P59091 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 LINC00628-201ENST00000628516 1289 ntBASIC11.26□□□□□ -0.61
LINC00315P59091 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00315P59091 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00315P59091 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00315P59091 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00315P59091 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LINC00315P59091 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 AC084364.1-201ENST00000551967 1556 ntBASIC11.25□□□□□ -0.61
LINC00315P59091 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00315P59091 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00315P59091 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LINC00315P59091 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00315P59091 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00315P59091 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LINC00315P59091 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00315P59091 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00315P59091 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms