Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.32■□□□□ 0.04
CDH13P55290 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 MYO15B-237ENST00000642007 4893 ntBASIC15.32■□□□□ 0.04
CDH13P55290 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 CICP11-201ENST00000434745 2827 ntBASIC15.31■□□□□ 0.04
CDH13P55290 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH13P55290 AP000347.1-202ENST00000435868 847 ntBASIC15.31■□□□□ 0.04
CDH13P55290 HIST3H2BA-201ENST00000436555 524 ntBASIC15.31■□□□□ 0.04
CDH13P55290 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.31■□□□□ 0.04
CDH13P55290 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 AL009178.2-201ENST00000597278 2719 ntBASIC15.31■□□□□ 0.04
CDH13P55290 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH13P55290 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.31■□□□□ 0.04
CDH13P55290 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CDH13P55290 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH13P55290 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH13P55290 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH13P55290 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH13P55290 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH13P55290 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH13P55290 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH13P55290 AL133215.2-201ENST00000609242 977 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms