Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.42■□□□□ 0.06
CDKN2DP55273 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 AC068418.2-201ENST00000577309 3703 ntBASIC15.42■□□□□ 0.06
CDKN2DP55273 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDKN2DP55273 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDKN2DP55273 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDKN2DP55273 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.41■□□□□ 0.06
CDKN2DP55273 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDKN2DP55273 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.41■□□□□ 0.06
CDKN2DP55273 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CDKN2DP55273 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 TREML5P-201ENST00000421694 576 ntBASIC15.41■□□□□ 0.06
CDKN2DP55273 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 AC044860.1-202ENST00000559481 777 ntBASIC15.41■□□□□ 0.06
CDKN2DP55273 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.41■□□□□ 0.06
CDKN2DP55273 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.41■□□□□ 0.06
CDKN2DP55273 AL844908.2-201ENST00000609461 460 ntBASIC15.41■□□□□ 0.06
CDKN2DP55273 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDKN2DP55273 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.41■□□□□ 0.06
CDKN2DP55273 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.41■□□□□ 0.06
CDKN2DP55273 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 AC106881.1-201ENST00000605849 3329 ntBASIC15.41■□□□□ 0.06
CDKN2DP55273 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.41■□□□□ 0.06
CDKN2DP55273 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CDKN2DP55273 ZBED1P1-201ENST00000502364 1930 ntBASIC15.41■□□□□ 0.06
CDKN2DP55273 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKN2DP55273 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDKN2DP55273 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKN2DP55273 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKN2DP55273 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDKN2DP55273 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKN2DP55273 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKN2DP55273 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.4■□□□□ 0.06
CDKN2DP55273 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.4■□□□□ 0.06
CDKN2DP55273 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.4■□□□□ 0.06
CDKN2DP55273 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKN2DP55273 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 AC097493.3-201ENST00000509725 367 ntBASIC15.4■□□□□ 0.06
CDKN2DP55273 SDHAP3-202ENST00000515467 728 ntBASIC15.4■□□□□ 0.06
CDKN2DP55273 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDKN2DP55273 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
CDKN2DP55273 AL513477.1-201ENST00000602865 2407 ntBASIC15.4■□□□□ 0.06
CDKN2DP55273 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.4■□□□□ 0.06
CDKN2DP55273 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.4■□□□□ 0.06
CDKN2DP55273 CICP23-201ENST00000605013 2741 ntBASIC15.4■□□□□ 0.06
CDKN2DP55273 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKN2DP55273 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms