Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC022532.1-201ENST00000624563 1728 ntBASIC17.57■□□□□ 0.4
USP11P51784 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 AC092384.3-202ENST00000564646 2873 ntBASIC17.57■□□□□ 0.4
USP11P51784 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.56■□□□□ 0.4
USP11P51784 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.56■□□□□ 0.4
USP11P51784 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.56■□□□□ 0.4
USP11P51784 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.56■□□□□ 0.4
USP11P51784 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.56■□□□□ 0.4
USP11P51784 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.56■□□□□ 0.4
USP11P51784 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
USP11P51784 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
USP11P51784 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 AC104640.1-201ENST00000562617 2109 ntBASIC17.56■□□□□ 0.4
USP11P51784 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP11P51784 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
USP11P51784 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
USP11P51784 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
USP11P51784 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
USP11P51784 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.55■□□□□ 0.4
USP11P51784 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.55■□□□□ 0.4
USP11P51784 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.55■□□□□ 0.4
USP11P51784 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
USP11P51784 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.55■□□□□ 0.4
USP11P51784 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.55■□□□□ 0.4
USP11P51784 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP11P51784 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.55■□□□□ 0.4
USP11P51784 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.55■□□□□ 0.4
USP11P51784 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 HYMAI-201ENST00000635591 3347 ntBASIC17.54■□□□□ 0.4
USP11P51784 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.54■□□□□ 0.4
USP11P51784 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 C18orf15-201ENST00000623680 2534 ntBASIC17.54■□□□□ 0.4
USP11P51784 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.54■□□□□ 0.4
USP11P51784 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.54■□□□□ 0.4
USP11P51784 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
USP11P51784 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms