Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MTHFRP42898 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 AL133267.1-201ENST00000398220 340 ntBASIC16.3■□□□□ 0.2
MTHFRP42898 MIR1202-201ENST00000408529 83 ntBASIC16.3■□□□□ 0.2
MTHFRP42898 CD8B2-202ENST00000417670 633 ntBASIC16.3■□□□□ 0.2
MTHFRP42898 RNA5SP486-201ENST00000515961 83 ntBASIC16.3■□□□□ 0.2
MTHFRP42898 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
MTHFRP42898 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.3■□□□□ 0.2
MTHFRP42898 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.3■□□□□ 0.2
MTHFRP42898 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.3■□□□□ 0.2
MTHFRP42898 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.3■□□□□ 0.2
MTHFRP42898 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
MTHFRP42898 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MTHFRP42898 AC015818.8-201ENST00000587907 1519 ntBASIC16.29■□□□□ 0.2
MTHFRP42898 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 AC134407.2-201ENST00000625089 1978 ntBASIC16.29■□□□□ 0.2
MTHFRP42898 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 KRT8P35-201ENST00000483942 1338 ntBASIC16.29■□□□□ 0.2
MTHFRP42898 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 AL662890.1-201ENST00000396818 632 ntBASIC16.29■□□□□ 0.2
MTHFRP42898 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.29■□□□□ 0.2
MTHFRP42898 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.29■□□□□ 0.2
MTHFRP42898 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 ACTG1P17-201ENST00000558391 1119 ntBASIC16.29■□□□□ 0.2
MTHFRP42898 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.29■□□□□ 0.2
MTHFRP42898 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.29■□□□□ 0.2
MTHFRP42898 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
MTHFRP42898 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MTHFRP42898 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 AL391005.1-201ENST00000623953 2435 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 AL138709.1-201ENST00000614840 1693 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms