Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 AL662890.1-201ENST00000396818 632 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 EIF4HP1-201ENST00000453115 687 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.53■□□□□ 0.72
COL15A1P39059 AC126915.1-201ENST00000522847 1038 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 AP003171.2-201ENST00000528208 925 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.53■□□□□ 0.72
COL15A1P39059 CHMP4BP1-201ENST00000556017 588 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.53■□□□□ 0.72
COL15A1P39059 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL15A1P39059 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.53■□□□□ 0.72
COL15A1P39059 AC015967.2-201ENST00000624092 234 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 AC006435.4-201ENST00000625037 234 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 AL356737.1-201ENST00000634391 234 ntBASIC19.53■□□□□ 0.72
COL15A1P39059 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.53■□□□□ 0.72
COL15A1P39059 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 AP005117.1-202ENST00000581724 1908 ntBASIC19.52■□□□□ 0.72
COL15A1P39059 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL15A1P39059 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.52■□□□□ 0.72
COL15A1P39059 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.52■□□□□ 0.72
COL15A1P39059 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.52■□□□□ 0.72
COL15A1P39059 EIF3FP3-201ENST00000434851 1086 ntBASIC19.52■□□□□ 0.72
COL15A1P39059 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.52■□□□□ 0.72
COL15A1P39059 AC079328.1-201ENST00000560358 952 ntBASIC19.52■□□□□ 0.72
COL15A1P39059 NDUFV2P1-201ENST00000596415 907 ntBASIC19.52■□□□□ 0.72
COL15A1P39059 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.52■□□□□ 0.72
COL15A1P39059 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.52■□□□□ 0.72
COL15A1P39059 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 AC138627.1-207ENST00000641560 1006 ntBASIC19.52■□□□□ 0.72
COL15A1P39059 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.52■□□□□ 0.72
COL15A1P39059 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
COL15A1P39059 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL15A1P39059 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.52■□□□□ 0.72
COL15A1P39059 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL15A1P39059 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
COL15A1P39059 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.51■□□□□ 0.71
COL15A1P39059 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL15A1P39059 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 FAM8A4P-201ENST00000435433 1213 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.51■□□□□ 0.71
COL15A1P39059 UPF3AP2-201ENST00000457924 1132 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 PPY2P-201ENST00000582808 702 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.51■□□□□ 0.71
COL15A1P39059 AC016629.1-201ENST00000596579 586 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.51■□□□□ 0.71
COL15A1P39059 AC073413.1-201ENST00000603927 732 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL15A1P39059 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.51■□□□□ 0.71
COL15A1P39059 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL15A1P39059 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.51■□□□□ 0.71
COL15A1P39059 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.51■□□□□ 0.71
COL15A1P39059 AL158070.2-201ENST00000623713 1621 ntBASIC19.51■□□□□ 0.71
COL15A1P39059 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
COL15A1P39059 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.5■□□□□ 0.71
COL15A1P39059 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms