Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CHKAP35790 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 AC134407.2-201ENST00000625089 1978 ntBASIC16.51■□□□□ 0.23
CHKAP35790 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.51■□□□□ 0.23
CHKAP35790 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.5■□□□□ 0.23
CHKAP35790 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHKAP35790 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHKAP35790 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 SPDYE19P-201ENST00000338590 713 ntBASIC16.5■□□□□ 0.23
CHKAP35790 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.5■□□□□ 0.23
CHKAP35790 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.5■□□□□ 0.23
CHKAP35790 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.5■□□□□ 0.23
CHKAP35790 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.5■□□□□ 0.23
CHKAP35790 TIMM17BP1-201ENST00000545713 516 ntBASIC16.5■□□□□ 0.23
CHKAP35790 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
CHKAP35790 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.5■□□□□ 0.23
CHKAP35790 SRD5A3P1-201ENST00000603021 949 ntBASIC16.5■□□□□ 0.23
CHKAP35790 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.5■□□□□ 0.23
CHKAP35790 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.5■□□□□ 0.23
CHKAP35790 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHKAP35790 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHKAP35790 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.5■□□□□ 0.23
CHKAP35790 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKAP35790 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 AC112693.3-201ENST00000624819 1983 ntBASIC16.49■□□□□ 0.23
CHKAP35790 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.49■□□□□ 0.23
CHKAP35790 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.49■□□□□ 0.23
CHKAP35790 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.49■□□□□ 0.23
CHKAP35790 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 GNAQP1-201ENST00000444815 1067 ntBASIC16.49■□□□□ 0.23
CHKAP35790 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CHKAP35790 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 BNIP3P1-202ENST00000550043 1585 ntBASIC16.49■□□□□ 0.23
CHKAP35790 AC005225.4-201ENST00000557330 545 ntBASIC16.49■□□□□ 0.23
CHKAP35790 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.49■□□□□ 0.23
CHKAP35790 AC025048.6-201ENST00000634326 1161 ntBASIC16.49■□□□□ 0.23
CHKAP35790 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms