Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
LCN1P31025 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.51□□□□□ -0.09
LCN1P31025 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.51□□□□□ -0.09
LCN1P31025 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.51□□□□□ -0.09
LCN1P31025 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
LCN1P31025 AC055876.3-201ENST00000431496 288 ntBASIC14.51□□□□□ -0.09
LCN1P31025 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.51□□□□□ -0.09
LCN1P31025 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.51□□□□□ -0.09
LCN1P31025 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.51□□□□□ -0.09
LCN1P31025 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.51□□□□□ -0.09
LCN1P31025 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 AC138649.4-201ENST00000612222 287 ntBASIC14.51□□□□□ -0.09
LCN1P31025 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LCN1P31025 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 TNRC18P2-201ENST00000417666 2714 ntBASIC14.51□□□□□ -0.09
LCN1P31025 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 AC022532.1-201ENST00000624563 1728 ntBASIC14.51□□□□□ -0.09
LCN1P31025 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LCN1P31025 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LCN1P31025 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCN1P31025 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.51□□□□□ -0.09
LCN1P31025 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LCN1P31025 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
LCN1P31025 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.5□□□□□ -0.09
LCN1P31025 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LCN1P31025 AC105250.1-201ENST00000509378 2057 ntBASIC14.5□□□□□ -0.09
LCN1P31025 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LCN1P31025 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LCN1P31025 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LCN1P31025 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.5□□□□□ -0.09
LCN1P31025 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 TOMM22P5-201ENST00000416399 439 ntBASIC14.5□□□□□ -0.09
LCN1P31025 PMS2P2-201ENST00000425039 1128 ntBASIC14.5□□□□□ -0.09
LCN1P31025 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.5□□□□□ -0.09
LCN1P31025 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 RPL13P2-201ENST00000440687 659 ntBASIC14.5□□□□□ -0.09
LCN1P31025 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.5□□□□□ -0.09
LCN1P31025 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.5□□□□□ -0.09
LCN1P31025 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.5□□□□□ -0.09
LCN1P31025 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.5□□□□□ -0.09
LCN1P31025 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.5□□□□□ -0.09
LCN1P31025 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 AL844908.2-201ENST00000609461 460 ntBASIC14.5□□□□□ -0.09
LCN1P31025 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.5□□□□□ -0.09
LCN1P31025 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.5□□□□□ -0.09
LCN1P31025 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.5□□□□□ -0.09
LCN1P31025 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LCN1P31025 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCN1P31025 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms