Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A5P29400 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.27■□□□□ 0.52
COL4A5P29400 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.27■□□□□ 0.52
COL4A5P29400 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A5P29400 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A5P29400 PCDHA12-202ENST00000613593 2588 ntBASIC18.27■□□□□ 0.52
COL4A5P29400 AL008718.2-201ENST00000609206 1313 ntBASIC18.27■□□□□ 0.51
COL4A5P29400 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A5P29400 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A5P29400 AC112504.1-201ENST00000623415 1841 ntBASIC18.27■□□□□ 0.51
COL4A5P29400 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.27■□□□□ 0.51
COL4A5P29400 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.27■□□□□ 0.51
COL4A5P29400 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.26■□□□□ 0.51
COL4A5P29400 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.26■□□□□ 0.51
COL4A5P29400 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.26■□□□□ 0.51
COL4A5P29400 RN7SL67P-201ENST00000492147 296 ntBASIC18.26■□□□□ 0.51
COL4A5P29400 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A5P29400 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.26■□□□□ 0.51
COL4A5P29400 AC005962.1-201ENST00000584100 773 ntBASIC18.26■□□□□ 0.51
COL4A5P29400 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 AL136295.7-201ENST00000619226 1200 ntBASIC18.26■□□□□ 0.51
COL4A5P29400 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A5P29400 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A5P29400 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL4A5P29400 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
COL4A5P29400 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A5P29400 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL4A5P29400 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A5P29400 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COL4A5P29400 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.25■□□□□ 0.51
COL4A5P29400 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.25■□□□□ 0.51
COL4A5P29400 AL157813.1-201ENST00000612996 587 ntBASIC18.25■□□□□ 0.51
COL4A5P29400 AP001065.2-201ENST00000617205 644 ntBASIC18.25■□□□□ 0.51
COL4A5P29400 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A5P29400 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A5P29400 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A5P29400 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL4A5P29400 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL4A5P29400 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.25■□□□□ 0.51
COL4A5P29400 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A5P29400 PGAM1P5-201ENST00000548011 764 ntBASIC18.25■□□□□ 0.51
COL4A5P29400 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.25■□□□□ 0.51
COL4A5P29400 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A5P29400 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A5P29400 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A5P29400 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.25■□□□□ 0.51
COL4A5P29400 NAP1L6-202ENST00000641404 1222 ntBASIC18.25■□□□□ 0.51
COL4A5P29400 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
COL4A5P29400 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A5P29400 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A5P29400 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A5P29400 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A5P29400 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A5P29400 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A5P29400 AC008805.1-201ENST00000590892 364 ntBASIC18.24■□□□□ 0.51
COL4A5P29400 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms