Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 AC005840.4-201ENST00000541242 2494 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 AC104109.2-201ENST00000602919 1418 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA3P29320 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA3P29320 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 FAM220BP-201ENST00000377689 816 ntBASIC15.24■□□□□ 0.03
EPHA3P29320 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA3P29320 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.24■□□□□ 0.03
EPHA3P29320 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 AC008267.7-201ENST00000624570 1194 ntBASIC15.24■□□□□ 0.03
EPHA3P29320 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
EPHA3P29320 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
EPHA3P29320 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA3P29320 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
EPHA3P29320 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA3P29320 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA3P29320 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 AC015656.1-201ENST00000624209 3578 ntBASIC15.23■□□□□ 0.03
EPHA3P29320 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
EPHA3P29320 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.23■□□□□ 0.03
EPHA3P29320 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.23■□□□□ 0.03
EPHA3P29320 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
EPHA3P29320 AL135744.1-201ENST00000565098 629 ntBASIC15.23■□□□□ 0.03
EPHA3P29320 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms