Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RXRBP28702 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RXRBP28702 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.9■□□□□ 0.78
RXRBP28702 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRBP28702 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRBP28702 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC19.9■□□□□ 0.78
RXRBP28702 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.9■□□□□ 0.78
RXRBP28702 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RXRBP28702 SRP14-204ENST00000558720 780 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRBP28702 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRBP28702 AP000322.3-201ENST00000608665 388 ntBASIC19.9■□□□□ 0.78
RXRBP28702 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC19.9■□□□□ 0.78
RXRBP28702 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC19.9■□□□□ 0.78
RXRBP28702 AC020763.4-201ENST00000623414 4170 ntBASIC19.9■□□□□ 0.78
RXRBP28702 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 HTR7P1-202ENST00000624664 4411 ntBASIC19.9■□□□□ 0.78
RXRBP28702 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
RXRBP28702 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RXRBP28702 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.9■□□□□ 0.78
RXRBP28702 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RXRBP28702 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RXRBP28702 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RXRBP28702 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RXRBP28702 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RXRBP28702 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.89■□□□□ 0.77
RXRBP28702 OR51A9P-201ENST00000422578 911 ntBASIC19.89■□□□□ 0.77
RXRBP28702 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC19.89■□□□□ 0.77
RXRBP28702 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RXRBP28702 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RXRBP28702 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.89■□□□□ 0.77
RXRBP28702 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC19.89■□□□□ 0.77
RXRBP28702 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RXRBP28702 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.89■□□□□ 0.77
RXRBP28702 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RXRBP28702 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.88■□□□□ 0.77
RXRBP28702 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.88■□□□□ 0.77
RXRBP28702 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.88■□□□□ 0.77
RXRBP28702 KRT8P31-201ENST00000504812 1408 ntBASIC19.88■□□□□ 0.77
RXRBP28702 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RXRBP28702 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.88■□□□□ 0.77
RXRBP28702 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.88■□□□□ 0.77
RXRBP28702 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RXRBP28702 RPL35P9-201ENST00000446059 350 ntBASIC19.88■□□□□ 0.77
RXRBP28702 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 RBM4-207ENST00000506523 654 ntTSL 3 BASIC19.88■□□□□ 0.77
RXRBP28702 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC19.88■□□□□ 0.77
RXRBP28702 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC19.88■□□□□ 0.77
RXRBP28702 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19.88■□□□□ 0.77
RXRBP28702 AC018846.1-201ENST00000568231 183 ntBASIC19.88■□□□□ 0.77
RXRBP28702 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RXRBP28702 MBP-238ENST00000580402 915 ntTSL 5 BASIC19.88■□□□□ 0.77
RXRBP28702 MIR4313-201ENST00000580760 101 ntBASIC19.88■□□□□ 0.77
RXRBP28702 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.88■□□□□ 0.77
RXRBP28702 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RXRBP28702 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms