Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDH1P12830 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 AC055876.3-201ENST00000431496 288 ntBASIC15.27■□□□□ 0.04
CDH1P12830 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CDH1P12830 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH1P12830 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH1P12830 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH1P12830 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH1P12830 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH1P12830 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH1P12830 AC010336.2-201ENST00000564226 506 ntBASIC15.27■□□□□ 0.04
CDH1P12830 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 AC138649.4-201ENST00000612222 287 ntBASIC15.27■□□□□ 0.04
CDH1P12830 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH1P12830 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CDH1P12830 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDH1P12830 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH1P12830 C8orf49-201ENST00000525043 1968 ntBASIC15.27■□□□□ 0.03
CDH1P12830 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.27■□□□□ 0.03
CDH1P12830 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDH1P12830 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CDH1P12830 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH1P12830 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH1P12830 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH1P12830 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH1P12830 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH1P12830 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH1P12830 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDH1P12830 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 TARDBPP1-201ENST00000442013 1203 ntBASIC15.26■□□□□ 0.03
CDH1P12830 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH1P12830 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH1P12830 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH1P12830 AL390955.2-201ENST00000603032 514 ntBASIC15.26■□□□□ 0.03
CDH1P12830 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.26■□□□□ 0.03
CDH1P12830 AL590560.3-201ENST00000623350 461 ntBASIC15.26■□□□□ 0.03
CDH1P12830 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDH1P12830 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH1P12830 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms