Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 AC025048.3-201ENST00000590609 569 ntBASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 AC005702.4-201ENST00000618393 416 ntBASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 AC007431.3-201ENST00000623221 587 ntBASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 AC006058.4-201ENST00000624016 1670 ntBASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 C8orf49-201ENST00000525043 1968 ntBASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 SSR4P1-203ENST00000599569 2260 ntBASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMIGD3P0DMS9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AC099063.4-201ENST00000641099 1602 ntBASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 KRT8P37-201ENST00000451609 1420 ntBASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AP006294.1-201ENST00000415407 339 ntBASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 HIST3H2BA-201ENST00000436555 524 ntBASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AC008494.3-201ENST00000606615 944 ntBASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 AC023157.3-201ENST00000619086 2088 ntBASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMIGD3P0DMS9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMIGD3P0DMS9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms