Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MMP2P08253 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
MMP2P08253 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.65■□□□□ 0.1
MMP2P08253 AC026410.3-201ENST00000514280 936 ntBASIC15.65■□□□□ 0.1
MMP2P08253 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.65■□□□□ 0.1
MMP2P08253 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MMP2P08253 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.65■□□□□ 0.1
MMP2P08253 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.65■□□□□ 0.1
MMP2P08253 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MMP2P08253 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.65■□□□□ 0.1
MMP2P08253 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.65■□□□□ 0.1
MMP2P08253 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MMP2P08253 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 MROH4P-201ENST00000431302 1578 ntBASIC15.65■□□□□ 0.1
MMP2P08253 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MMP2P08253 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MMP2P08253 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP2P08253 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MMP2P08253 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
MMP2P08253 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.64■□□□□ 0.09
MMP2P08253 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 AL391825.1-201ENST00000457671 1364 ntBASIC15.64■□□□□ 0.09
MMP2P08253 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 AL353779.1-201ENST00000434793 351 ntBASIC15.64■□□□□ 0.09
MMP2P08253 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 VDAC1P7-201ENST00000462417 847 ntBASIC15.64■□□□□ 0.09
MMP2P08253 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 AC123567.1-201ENST00000548294 1261 ntBASIC15.64■□□□□ 0.09
MMP2P08253 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 AC190387.1-201ENST00000551683 408 ntBASIC15.64■□□□□ 0.09
MMP2P08253 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.64■□□□□ 0.09
MMP2P08253 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.64■□□□□ 0.09
MMP2P08253 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 AC093726.1-201ENST00000608064 963 ntBASIC15.64■□□□□ 0.09
MMP2P08253 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.64■□□□□ 0.09
MMP2P08253 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.64■□□□□ 0.09
MMP2P08253 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MMP2P08253 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 DBET-201ENST00000630918 3363 ntBASIC15.63■□□□□ 0.09
MMP2P08253 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MMP2P08253 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MMP2P08253 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MMP2P08253 PIN1P1-201ENST00000412108 996 ntBASIC15.63■□□□□ 0.09
MMP2P08253 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.63■□□□□ 0.09
MMP2P08253 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms